BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B06SP1|AL430346
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1648 1773 0.0
>3x_Contig1648
Length = 16375
Score = 1773 bits (892), Expect = 0.0
Identities = 896/900 (99%)
Strand = Plus / Minus
Query: 1 aagataacaccgacaagagaaaagacacaggatgagacatggctcaatggtgtgggcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3744 aagataacaccgacaagagaaaagacacaggatgagacatggctcaatggtgtgggcagg 3685
Query: 61 attcttgctgtagctttagtggttcaattttcaaccggtgaaatcatctggtgggatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3684 attcttgctgtagctttagtggttcaattttcaaccggtgaaatcatctggtgggatact 3625
Query: 121 gtaaggcttgttttgtaaattttggtgtattgcccattgaactagtagtttctgtcgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 gtaaggcttgttttgtaaattttggtgtattgcccattgaactagtagtttctgtcgttc 3565
Query: 181 tgctttcactttcgatgacgaaattcgttcttgaactaaggaatcggtccatgttagtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3564 tgctttcactttcgatgacgaaattcgttcttgaactaaggaatcggtccatgttagtgg 3505
Query: 241 cttgaacttggaatctggtccatgtctggctacaattgatcctaaatgctgataatattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 cttgaacttggaatctggtccatgtctggctacaattgatcctaaatgctgataatattc 3445
Query: 301 tatatcctttggtgttggtaaagagtgataatcagaggaagtgatactctcgttgtcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3444 tatatcctttggtgttggtaaagagtgataatcagaggaagtgatactctcgttgtcagc 3385
Query: 361 gtcaaccatatctgacttagtgattgatcccaggatgacaagatcgatgatagaggcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 gtcaaccatatctgacttagtgattgatcccaggatgacaagatcgatgatagaggcttg 3325
Query: 421 cmactcagccaattggaatgggatgatgttttttggtaggagtgagaagaatattgttgg 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 caactcagccaattggaatgggatgatgttttttggtaggagtgagaagaatattgttgg 3265
Query: 481 gtccggtttgtatactatttgttcccataagttgtacaaacggttcgattgatttcgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 gtccggtttgtatactatttgttcccataagttgtacaaacggttcgattgatttcgaaa 3205
Query: 541 camatctgaatgatacgatttaaggaacgggacaccgtattggaatcctgtcgcccatat 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 caaatctgaatgatacgatttaaggaacgggacaccgtattggaatcctgtcgcccatat 3145
Query: 601 gatgtgatctacattctgaatcgaagtgccgtctatgamatgaactgtgttcgaattggg 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3144 gatgtgatctacattctgaatcgaagtgccgtctatgaaatgaactgtgttcgaattggg 3085
Query: 661 ttcatctaaggattggmtctgtgatacgacttcaatgatgctatttgctggccaattggt 720
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 ttcatctaaggattggatctgtgatacgacttcaatgatgctatttgctggccaattggt 3025
Query: 721 ttcggaatctggtttcacactatggtaaactttcgaggcagtggtactgatctgggtcgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 ttcggaatctggtttcacactatggtaaactttcgaggcagtggtactgatctgggtcgc 2965
Query: 781 gatgtcggtcgctgaacttgcgttacctactacaactacgtttagtcccctgtagtgttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 gatgtcggtcgctgaacttgcgttacctactacaactacgtttagtcccctgtagtgttc 2905
Query: 841 agagttgacgaaattcttggaatgagactggtttttccattggtatgatccaggtactgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 agagttgacgaaattcttggaatgagactggtttttccattggtatgatccaggtactgt 2845
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5554
Number of Sequences: 1807
Number of extensions: 5554
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)